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1

Accuracy and reproducibility of a multiplex immunoassay platform: A validation study

Julie A. Bastarache, Tatsuki Koyama, Nancy E. Wickersham, Daphne B. Mitchell, Ray L. Mernaugh, Lorraine B. Ware

Journal:

Journal of Immunological Methods

Year:

2011

Language:

english

File:

PDF, 495 KB

english, 2011

2

Systematic comparison of phenome-wide association study of electronic medical record data and genome-wide association study data

Denny, Joshua C, Bastarache, Lisa, Ritchie, Marylyn D, Carroll, Robert J, Zink, Raquel, Mosley, Jonathan D, Field, Julie R, Pulley, Jill M, Ramirez, Andrea H, Bowton, Erica, Basford, Melissa A, Carrel

Journal:

Nature Biotechnology

Year:

2013

Language:

english

File:

PDF, 1.17 MB

english, 2013

3

Fitness Impaired Drug Resistant HIV-1 Is Not Compromised in Cell-to-Cell Transmission or Establishment of and Reactivation from Latency

Bastarache, Sophie, Mesplède, Thibault, Donahue, Daniel, Sloan, Richard, Wainberg, Mark

Journal:

Year:

2014

Language:

english

File:

PDF, 756 KB

english, 2014

4

Sepsis

Bastarache, Julie A., Seeley, Eric J.

Journal:

Clinics in Chest Medicine

Year:

2016

Language:

english

File:

PDF, 180 KB

english, 2016

5

Le rôle des tribunaux dans la mise en oeuvre des droits linguistiques au Canada

Bastarache, Michel

Journal:

Revue générale de droit

Year:

2010

Language:

french

File:

PDF, 1.58 MB

french, 2010

6

Accelerating Precision Drug Development and Drug Repurposing by Leveraging Human Genetics

Pulley, Jill M., Shirey-Rice, Jana K., Lavieri, Robert R., Jerome, Rebecca N., Zaleski, Nicole M., Aronoff, David M., Bastarache, Lisa, Niu, Xinnan, Holroyd, Kenneth J., Roden, Dan M., Skaar, Eric P.,

Journal:

Assay and Drug Development Technologies

Year:

2017

Language:

english

File:

PDF, 361 KB

english, 2017

7

Phenotype risk scores identify patients with unrecognized Mendelian disease patterns

Bastarache, Lisa, Hughey, Jacob J., Hebbring, Scott, Marlo, Joy, Zhao, Wanke, Ho, Wanting T., Van Driest, Sara L., McGregor, Tracy L., Mosley, Jonathan D., Wells, Quinn S., Temple, Michael, Ramirez, A

Journal:

Year:

2018

Language:

english

File:

PDF, 1.73 MB

english, 2018

8

GBT1118, a compound that increases the oxygen affinity of hemoglobin, improves survival in murine hypoxic acute lung injury

Putz, Nathan D., Shaver, Ciara M., Dufu, Kobina, Li, Chien-Ming, Xu, Qing, Hutchaleelaha, Athiwat, Lehrer-Graiwer, Josh, Majka, Susan M., Ware, Lorraine B., Bastarache, Julie A.

Journal:

Journal of Applied Physiology

Year:

2018

Language:

english

File:

PDF, 1.07 MB

english, 2018

9

Trajectories of Big Five Personality Traits: A Coordinated Analysis of 16 Longitudinal Samples

Graham, Eileen K., Weston, Sara J., Gerstorf, Denis, Yoneda, Tomiko B., Booth, Tom, Beam, Christopher R., Petkus, Andrew J., Drewelies, Johanna, Hall, Andrew N., Bastarache, Emily D., Estabrook, Ryne,

Journal:

European Journal of Personality

Year:

2020

File:

PDF, 1.93 MB

2020

10

Grain refinement and superplastic flow in an aluminum alloy processed by high-pressure torsion

Sergey V. Dobatkin, Elena N. Bastarache, Genki Sakai, Takeshi Fujita, Zenji Horita, Terence G. Langdon

Journal:

Materials Science and Engineering: A

Year:

2005

Language:

english

File:

PDF, 278 KB

english, 2005

11

Interrelations between the properties and structure of thermomechanically-treated equiatomic Ti–Ni alloy

V. Brailovski, S.D. Prokoshkin, I. Yu. Khmelevskaya, K.E. Inaekyan, V. Demers, E. Bastarache, S.V. Dobatkin, E.V. Tatyanin

Journal:

Materials Science and Engineering: A

Year:

2006

Language:

english

File:

PDF, 267 KB

english, 2006

12

Effect of forest removal on the abundance of the endangered American burying beetle,Nicrophorus americanus(Coleoptera: Silphidae)

J. Curtis Creighton, Robert Bastarache, Mark V. Lomolino, Mark C. Belk

Journal:

Journal of Insect Conservation

Year:

2009

Language:

english

File:

PDF, 234 KB

english, 2009

13

26 Development of the cultivation of Laminaria Saccharina as the extractive inorganic component of an integrated aquaculture system and monitoring of therapeutants and phycotoxins

T. Chopin, S. Bastarache, E. Belyea, K. Haya, D. Sephton, J. L. Martin, S. Eddy, I. Stewart

Journal:

Journal of Phycology

Year:

2003

Language:

english

File:

PDF, 499 KB

english, 2003

14

Variants Near FOXE1 Are Associated with Hypothyroidism and Other Thyroid Conditions: Using Electronic Medical Records for Genome- and Phenome-wide Studies

Joshua C. Denny, Dana C. Crawford, Marylyn D. Ritchie, Suzette J. Bielinski, Melissa A. Basford, Yuki Bradford, High Seng Chai, Lisa Bastarache, Rebecca Zuvich, Peggy Peissig, David Carrell, Andrea H.

Journal:

The American Journal of Human Genetics

Year:

2011

Language:

english

File:

PDF, 567 KB

english, 2011

15

Postoperative Estradiol Levels Associate With Development of Primary Graft Dysfunction in Lung Transplantation Patients

Julie A. Bastarache, Joshua M. Diamond, Steven M. Kawut, David J. Lederer, Lorraine B. Ware, Jason D. Christie

Journal:

Gender Medicine

Year:

2012

Language:

english

File:

PDF, 463 KB

english, 2012

16

Tracking medical students’ clinical experiences using natural language processing

Joshua C. Denny, Lisa Bastarache, Elizabeth Ann Sastre, Anderson Spickard III

Journal:

Journal of Biomedical Informatics

Year:

2009

Language:

english

File:

PDF, 397 KB

english, 2009

17

Alveolar fluid clearance is faster in women with acute lung injury compared to men

Julie A. Bastarache, Thida Ong, Michael A. Matthay, Lorraine B. Ware

Journal:

Journal of Critical Care

Year:

2011

Language:

english

File:

PDF, 469 KB

english, 2011

18

Noninvasive penile arterial evaluation in120 males with erectile dysfunction

Alan J. Wabrek, Marta M. Shelley, Leslie M. Horowitz, Marie M. Bastarache, Janice E. Giuca

Journal:

Year:

1983

Language:

english

File:

PDF, 613 KB

english, 1983

19

A genome- and phenome-wide association study to identify genetic variants influencing platelet count and volume and their pleiotropic effects

Shameer, Khader, Denny, Joshua C., Ding, Keyue, Jouni, Hayan, Crosslin, David R., Andrade, Mariza, Chute, Christopher G., Peissig, Peggy, Pacheco, Jennifer A., Li, Rongling, Bastarache, Lisa, Kho, Abe

Journal:

Year:

2014

Language:

english

File:

PDF, 769 KB

english, 2014

20

Longer storage duration of red blood cells is associated with an increased risk of acute lung injury in patients with sepsis

Janz, David R, Zhao, Zhiguo, Koyama, Tatsuki, May, Addison K, Bernard, Gordon R, Bastarache, Julie A, Young, Pampee P, Ware, Lorraine B

Journal:

Annals of Intensive Care

Year:

2013

Language:

english

File:

PDF, 384 KB

english, 2013

21

Latent HIV-1 can be reactivated by superinfection in a Tat-dependent manner, which can lead to the emergence of recombinant viruses

Daniel Aaron Donahue,Sophie M Bastarache,Richard D Sloan…

Journal:

Year:

2013

Language:

english

File:

PDF, 68 KB

english, 2013

22

Validation of a multiplex electrochemiluminescent immunoassay platform in human and mouse samples

Bastarache, J.A., Koyama, T., Wickersham, N.E., Ware, L.B.

Journal:

Journal of Immunological Methods

Year:

2014

Language:

english

File:

PDF, 1.35 MB

english, 2014

23

Mechanical Stretch Inhibits Lipopolysaccharide-induced Keratinocyte-derived Chemokine and Tissue Factor Expression While Increasing Procoagulant Activity in Murine Lung Epithelial Cells

Sebag, S. C., Bastarache, J. A., Ware, L. B.

Journal:

Journal of Biological Chemistry

Year:

2013

Language:

english

File:

PDF, 1.67 MB

english, 2013

24

Natural Language Processing Improves Identification of Colorectal Cancer Testing in the Electronic Medical Record

Denny, J. C., Choma, N. N., Peterson, J. F., Miller, R. A., Bastarache, L., Li, M., Peterson, N. B.

Journal:

Medical Decision Making

Year:

2012

Language:

english

File:

PDF, 151 KB

english, 2012

25

PheWAS: demonstrating the feasibility of a phenome-wide scan to discover gene-disease associations

Denny, J. C., Ritchie, M. D., Basford, M. A., Pulley, J. M., Bastarache, L., Brown-Gentry, K., Wang, D., Masys, D. R., Roden, D. M., Crawford, D. C.

Journal:

Year:

2010

Language:

english

File:

PDF, 333 KB

english, 2010

26

R PheWAS: data analysis and plotting tools for phenome-wide association studies in the R environment

Carroll, R. J., Bastarache, L., Denny, J. C.

Journal:

Year:

2014

Language:

english

File:

PDF, 193 KB

english, 2014

27

Genome- and Phenome-Wide Analyses of Cardiac Conduction Identifies Markers of Arrhythmia Risk

Ritchie, M. D., Denny, J. C., Zuvich, R. L., Crawford, D. C., Schildcrout, J. S., Bastarache, L., Ramirez, A. H., Mosley, J. D., Pulley, J. M., Basford, M. A., Bradford, Y., Rasmussen, L. V., Pathak,

Journal:

Year:

2013

Language:

english

File:

PDF, 2.36 MB

english, 2013

28

ARDS: New Mechanistic Insights, New Therapeutic Directions

Ware, Lorraine B., Bastarache, Julie A., Calfee, Carolyn S.

Journal:

Clinics in Chest Medicine

Year:

2014

Language:

english

File:

PDF, 252 KB

english, 2014

29

Clinical and Biological Heterogeneity in Acute Respiratory Distress Syndrome

Shaver, Ciara M., Bastarache, Julie A.

Journal:

Clinics in Chest Medicine

Year:

2014

Language:

english

File:

PDF, 1.52 MB

english, 2014

30

[IEEE 2012 IEEE Second International Conference on Healthcare Informatics, Imaging and Systems Biology (HISB) - La Jolla, CA, USA (2012.09.27-2012.09.28)] 2012 IEEE Second International Conference on Healthcare Informatics, Imaging and Systems Biology - A General Purpose Phenotype Algorithm for Venous Thromboembolism Using Billing Codes and Natural Language Processing

Hinz, Eugenia R. McPeek, Bastarache, Lisa, Denny, Joshua C

Year:

2012

Language:

english

File:

PDF, 203 KB

english, 2012

31

Some Characteristics of Corticosterone Uptake by the Dorsal Hippocampus and the Adenohypophysis in the Rat

Lemaire, Irma, Dupont, André, Bastarache, Edouard, Labrie, Fernand, Fortier, Claude

Journal:

Canadian Journal of Physiology and Pharmacology

Year:

1974

Language:

english

File:

PDF, 582 KB

english, 1974

32

The alveolar epithelium can initiate the extrinsic coagulation cascade through expression of tissue factor

Bastarache, J. A, Wang, L., Geiser, T., Wang, Z., Albertine, K. H, Matthay, M. A, Ware, L. B

Journal:

Year:

2007

Language:

english

File:

PDF, 803 KB

english, 2007

33

Acute Lung Injury Edema Fluid Decreases Net Fluid Transport across Human Alveolar Epithelial Type II Cells

Lee, Jae W., Fang, Xiaohui, Dolganov, Gregory, Fremont, Richard D., Bastarache, Julie A., Ware, Lorraine B., Matthay, Michael A.

Journal:

Journal of Biological Chemistry

Year:

2007

Language:

english

File:

PDF, 1017 KB

english, 2007

34

Effect of Hippocampal Stimulation on the Plasma Thyrotropin (THS) and Corticosterone Responses to Acute Cold Exposure in the Rat

Dupont, André, Bastarache, Edouard, Endröczi, Elemer, Fortier, Claude

Journal:

Canadian Journal of Physiology and Pharmacology

Year:

1972

Language:

english

File:

PDF, 362 KB

english, 1972

35

Article

Bastarache, Daniel, El-Jabi, Nassir, Turkkan, Noyan, Clair, Thomas A

Journal:

Canadian Journal of Civil Engineering

Year:

1997

File:

PDF, 281 KB

1997

36

Substructure and Nanocrystalline Structure Effects in Thermomechanically Treated Ti-Ni Alloys

Inaekyan, K.E., Prokoshkin, Sergey D., Brailovski, Vladimir, Khmelevskaya, I., Demers, Vincent, Dobatkin, Sergey, Tatyanin, E.V., Bastarache, E.

Journal:

Materials Science Forum

Year:

2006

Language:

english

File:

PDF, 6.66 MB

english, 2006

37

Latent HIV-1 Can Be Reactivated by Cellular Superinfection in a Tat-Dependent Manner, Which Can Lead to the Emergence of Multidrug-Resistant Recombinant Viruses

Donahue, D. A., Bastarache, S. M., Sloan, R. D., Wainberg, M. A.

Journal:

Journal of Virology

Year:

2013

Language:

english

File:

PDF, 2.35 MB

english, 2013

38

Determining the aetiology of pulmonary oedema by the oedema fluid-to-plasma protein ratio

Ware, L. B., Fremont, R. D., Bastarache, J. A., Calfee, C. S., Matthay, M. A.

Journal:

European Respiratory Journal

Year:

2010

Language:

english

File:

PDF, 335 KB

english, 2010

39

A Randomized Trial Comparing Didactics, Demonstration, and Simulation for Teaching Teamwork to Medical Residents

Semler, Matthew W., Keriwala, Raj D., Clune, Jennifer K., Rice, Todd W., Pugh, Meredith E., Wheeler, Arthur P., Miller, Alison N., Banerjee, Arna, Terhune, Kyla, Bastarache, Julie A.

Journal:

Annals of the American Thoracic Society

Year:

2015

Language:

english

File:

PDF, 686 KB

english, 2015

40

Markers of Inflammation and Coagulation May Be Modulated by Enteral Feeding Strategy

Bastarache, J. A., Ware, L. B., Girard, T. D., Wheeler, A. P., Rice, T. W.

Journal:

Journal of Parenteral and Enteral Nutrition

Year:

2012

Language:

english

File:

PDF, 845 KB

english, 2012

41

Randomized, Placebo-Controlled Trial of Acetaminophen for the Reduction of Oxidative Injury in Severe Sepsis

Janz, David R., Bastarache, Julie A., Rice, Todd W., Bernard, Gordon R., Warren, Melissa A., Wickersham, Nancy, Sills, Gillian, Oates, John A., Roberts, L. Jackson, Ware, Lorraine B.

Journal:

Critical Care Medicine

Year:

2015

Language:

english

File:

PDF, 868 KB

english, 2015

42

Prehospital Aspirin Use Is Associated With Reduced Risk of Acute Respiratory Distress Syndrome in Critically Ill Patients

Chen, Wei, Janz, David R., Bastarache, Julie A., May, Addison K., O’Neal, Hollis R., Bernard, Gordon R., Ware, Lorraine B.

Journal:

Critical Care Medicine

Year:

2015

Language:

english

File:

PDF, 542 KB

english, 2015

43

Phenome-wide association studies demonstrating pleiotropy of genetic variants within FTO with and without adjustment for body mass index

Cronin, Robert M., Field, Julie R., Bradford, Yuki, Shaffer, Christian M., Carroll, Robert J., Mosley, Jonathan D., Bastarache, Lisa, Edwards, Todd L., Hebbring, Scott J., Lin, Simon, Hindorff, Lucia

Journal:

Frontiers in Genetics

Year:

2014

Language:

english

File:

PDF, 3.27 MB

english, 2014

44

Thinking outside the cell: how cell-free hemoglobin can potentiate acute lung injury

Bastarache, J. A., Roberts, L. J., Ware, L. B.

Journal:

AJP Lung Cellular and Molecular Physiology

Year:

2014

Language:

english

File:

PDF, 43 KB

english, 2014

45

Low levels of tissue factor lead to alveolar haemorrhage, potentiating murine acute lung injury and oxidative stress

Bastarache, J. A., Sebag, S. C., Clune, J. K., Grove, B. S., Lawson, W. E., Janz, D. R., Roberts, L. J., Dworski, R., Mackman, N., Ware, L. B.

Journal:

Year:

2012

Language:

english

File:

PDF, 442 KB

english, 2012

46

Procoagulant alveolar microparticles in the lungs of patients with acute respiratory distress syndrome

Bastarache, J. A., Fremont, R. D., Kropski, J. A., Bossert, F. R., Ware, L. B.

Journal:

AJP Lung Cellular and Molecular Physiology

Year:

2009

Language:

english

File:

PDF, 852 KB

english, 2009

47

The complex role of fibrin in acute lung injury

Bastarache, J. A.

Journal:

AJP Lung Cellular and Molecular Physiology

Year:

2009

Language:

english

File:

PDF, 45 KB

english, 2009

48

Interferon-γ and tumor necrosis factor-α act synergistically to up-regulate tissue factor in alveolar epithelial cells

Bastarache, Julie A., Sebag, Sara C., Grove, Brandon S., Ware, Lorraine B.

Journal:

Experimental Lung Research

Year:

2011

Language:

english

File:

PDF, 404 KB

english, 2011

49

Intra-alveolar tissue factor pathway inhibitor is not sufficient to block tissue factor procoagulant activity

Bastarache, J. A., Wang, L., Wang, Z., Albertine, K. H., Matthay, M. A., Ware, L. B.

Journal:

AJP Lung Cellular and Molecular Physiology

Year:

2008

Language:

english

File:

PDF, 682 KB

english, 2008

50

Fanning the Fire: Can Methemoglobin Enhance Neutrophil Activation?

Bastarache, Julie A., Wynn, James L., Ware, Lorraine B.

Journal:

Year:

2015

Language:

english

File:

PDF, 143 KB

english, 2015

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